Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889682.1_cds_XP_016444387.1_39455
CDS Infomation

[gene=LOC107769664] [db_xref=GeneID:107769664] [protein=matrix metalloproteinase-2-like] [protein_id=XP_016444387.1] [location=complement(42014..43339)] [gbkey=CDS]
Sequence

ATGATGCCACAACCAAGAAGAAAAAAGTGGACTGAGGCAGAAGAAAGAACTTTAATTGAT
AAGTATGGTGAGATGTTATGTGATGGGAGTTTAGCTAAGATGAAAACTAGGGAAAAGAAG
TATAGACCTATTGCTTTACATGTAAATTCTGTGCACCATGTTCGTGATCCGATCACGTAT
CCATGGCAATGGACTTGGAAGGATGTGTCAACTAAAGTGCAGAATATGAGGCACCAGTAT
ACATTAGTGAAGCAGAAGATTAAGAAGCCAAACTCTGGGGAGGATGAGTCGGGTGTTGGG
GAGGAGTTTGATTGGATGGAGGGGTTAACTCATTGGTCGAACTTCTTGAGGTATAAGGAA
GTGTTTGGGGATGTGAATACGCTTGTTTTCAGTTGTAGTGACTCCATGGCGGTTGTAGGA
GACGGGATTGAAAATCGTGTGGGATTTGATGGGACTGGTAATGGTATCGGGATTGATCAA
TTCGGGCATCTAGGTCATGCTGGCGACGGTGATTTTGCCGGAGGTATTAATGGGGTGGAT
CATGGTGTTACCGGTATGGAGTTTGATTATGATGGGGAAGAAGGAGAGGGGAATTTCAAT
GGTAATATTAGGAGGAATAGTCATATGAAGGAAGATGTGGACGATGGATTTGTTTACGAA
GATATCGAGGCAACTGGATCCGATACGAGAAAGAAGAAGAAGATGTTGAAAGGGGTAGAG
AAGAGGGCATGGGGTTTTCTTGCAACGCAGTTGGCACACTTAAAGGAAATGGAAGCTCGG
TTCGAGCAACGTGATGCTGAGAGAGAGCGGGAGAGGCAGAGGAGAGAACATCTTAGAACG
GAACTTGAACAAGAACGTGAGAGAAAATGGGAGGAAAGAGAAAGAGAGAGGGAAGAAAGG
GAGAAAACGATGGAGAAGTTGCAGAGACAGAGAATTCAAGAATGGGAAATAATGGAGAAG
GAAAGTGAGGAGAGAGAGAGGAGGAGAAGAGAGGAACAACTTATATTTGAAAGAGAACGT
GAAGAAAGAATGAACAAGAGGAGATTAGACTGGAAGAAGAGGATTGACGAGACGTTAGGT
CAGCATCGCGCTGATATGAGCCAGATCCAGACTCGAATACTTCACGAACAACAAAATCTT
ACTAGTCAGCTGCTCGGAATTTTTTCTCAGTGGACTGGTCATCCAACCGGGATTTCTGAT
CACACAGGAGCTAACCATTATCTTTCACAAATGATACAAAACTTGCACCATGTGAATGGT
ATGGTTCATGGCGATGCAAGAGTTGAAGGAGATGCTCAAGAAGATCAATTTATTGTAGAT
GGATGA

Peptide Sequence

PEP ID

XP_016444387.1
PEP Infomation

PREDICTED: matrix metalloproteinase-2-like [Nicotiana tabacum]
Sequence

MMPQPRRKKWTEAEERTLIDKYGEMLCDGSLAKMKTREKKYRPIALHVNSVHHVRDPITY
PWQWTWKDVSTKVQNMRHQYTLVKQKIKKPNSGEDESGVGEEFDWMEGLTHWSNFLRYKE
VFGDVNTLVFSCSDSMAVVGDGIENRVGFDGTGNGIGIDQFGHLGHAGDGDFAGGINGVD
HGVTGMEFDYDGEEGEGNFNGNIRRNSHMKEDVDDGFVYEDIEATGSDTRKKKKMLKGVE
KRAWGFLATQLAHLKEMEARFEQRDAERERERQRREHLRTELEQERERKWEEREREREER
EKTMEKLQRQRIQEWEIMEKESEERERRRREEQLIFEREREERMNKRRLDWKKRIDETLG
QHRADMSQIQTRILHEQQNLTSQLLGIFSQWTGHPTGISDHTGANHYLSQMIQNLHHVNG
MVHGDARVEGDAQEDQFIVDG

Transcript Sequence

Gene sequence data has not been registered.